Hi Mickstafa,
I'm sorry to hear about your issue. I too have a very similar issue with my 4.1s - what you are describing is almost exactly what I have (except that I replaced R12). You have to remember that I replaced the components before anything happened.
On my unit, the +/- voltage coming out of the board has issues, if I connect the white ribbon cables (one of them is input and the other is output) the power coming into the regulators goes close to zero - which tells me that there is short somewhere. I replaced the regulators and the same problem exist. Unfortunately, I don't have enough time right now to address the issue.
What I ended up doing was finding a used PM5.1 sub on Ebay and connecting my sats to it. Works fine.